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PDB file Author(s) Title Date Resolution, Å
2odi.pdb Sokolowska, M.,
Kaus-Drobek, M.,
Czapinska, H.,
Tamulaitis, G.,
Szczepanowski, R.H.,
Urbanke, C., Siksnys, V.,
Bochtler, M.

Monomeric restriction
endonuclease BcnI in the
apo form and in an
asymmetric complex with
target DNA.

2007 1.45
2ofi.pdb Metz, A.H., Hollis, T.,
Eichman, B.F.

DNA damage recognition
and repair by
3-methyladenine DNA
glycosylase I (TAG).

2007 1.85
2pfn.pdb Garcia-Diaz, M., Bebenek,
K., Krahn, J.M.,
Pedersen, L.C., Kunkel,
T.A.

Role of the catalytic
metal during
polymerization by DNA
polymerase lambda.

2007 1.90
2r1j.pdb Watkins, D., Hsiao, C.,
Woods, K.K., Koudelka,
G.B., Williams, L.D.

P22 c2 repressor-operator
complex: mechanisms of
direct and indirect
readout

2008 1.53
2vbo.pdb Redondo, P., Prieto, J.,
Munoz, I.G., Alibes, A.,
Stricher, F., Serrano,
L., Cabaniols, J.P.,
Daboussi, F., Arnould,
S., Perez, C., Duchateau,
P., Paques, F., Blanco,
F.J., Montoya, G.

Molecular Basis of
Xeroderma Pigmentosum
Group C DNA Recognition
by Engineered
Meganucleases

2008 1.8
2ve9.pdb Lowe, J., Ellonen, A.,
Allen, M.D., Atkinson,
C., Sherratt, D.J.,
Grainge, I.

Molecular Mechanism of
Sequence-Directed DNA
Loading and Translocation
by Ftsk.

2008 1.9
2ve9_1.pdb Lowe, J., Ellonen, A.,
Allen, M.D., Atkinson,
C., Sherratt, D.J.,
Grainge, I.

Molecular Mechanism of
Sequence-Directed DNA
Loading and Translocation
by Ftsk.

2008 1.9
2vla.pdb Sukackaite, R., Grazulis,
S., Bochtler, M.,
Siksnys, V.

The Recognition Domain of
the Bpuji Restriction
Endonuclease in Complex
with Cognate DNA at 1.3-A
Resolution.

2008 1.3
2voa.pdb Schmiedel, R., Kuettner,
E.B., Keim, A., Strater,
N., Greiner-Stoffele, T.

Structure and Function of
the Abasic Site
Specificity Pocket of an
Ap Endonuclease from
Archaeoglobus Fulgidus.

2009 1.7
2w42.pdb Parker, J.S., Parizotto,
E.A., Wang, M., Roe,
S.M., Barford, D.

Enhancement of the
Seed-Target Recognition
Step in RNA Silencing by
a Piwi-Mid Domain Protein

2009 1.9
2w7n.pdb Koenig, B., Mueller,
J.J., Lanka, E.,
Heinemann, U.

Crystal Structure of Kora
Bound to Operator DNA:
Insight Into Repressor
Cooperation in Rp4 Gene
Regulation

2009 1.85
2wbs.pdb Schuetz, A., Nana, D.,
Rose, C., Zocher, G.,
Milanovic, M.,
Koenigsmann, J., Blasig,
R., Heinemann, U.,
Carstanjen, D.

The Structure of the Klf4
DNA-Binding Domain Links
to Self-Renewal and
Macrophage
Differentiation.

2011 1.7
2wiw.pdb Carolis, C., Koehler, C.,
Sauter, C., Basquin, J.,
Suck, D., Toeroe, I.

Crystal Structures of
Holliday Junction
Resolvases from
Archaeoglobus Fulgidus
Bound to DNA Substrate

- 1.8
2xhi.pdb Dalhus, B., Forsbring,
M., Helle, I.H., Vik,
E.S., Forstrom, R.J.,
Backe, P.H., Alseth, I.,
Bjoras, M.

Separation-of-Function
Mutants Unravel the Dual-
Reaction Mode of Human
8-Oxoguanine DNA
Glycosylase.

2011 1.55
2xhi_1.pdb Dalhus, B., Forsbring,
M., Helle, I.H., Vik,
E.S., Forstrom, R.J.,
Backe, P.H., Alseth, I.,
Bjoras, M.

Separation-of-Function
Mutants Unravel the Dual-
Reaction Mode of Human
8-Oxoguanine DNA
Glycosylase.

2011 1.55
2xo6.pdb Hickman, A.B., James,
J.A., Barabas, O.,
Pasternak, C., Ton-Hoang,
B., Chandler, M., Sommer,
S., Dyda, F.

DNA Recognition and the
Precleavage State During
Single-Stranded DNA
Transposition in D.
Radiodurans.

2010 1.9
3aaf.pdb Kitano, K., Kim, S.Y.,
Hakoshima, T.

Structural basis for DNA
strand separation by the
unconventional
winged-helix domain of
RecQ helicase WRN

2010 1.9
3bam.pdb Viadiu, H., Aggarwal,
A.K.

The role of metals in
catalysis by the
restriction endonuclease
BamHI.

1998 1.80
3bm3.pdb Szczepanowski, R.H.,
Carpenter, M., Czapinska,
H., Tamulaitis, G.,
Siksnys, V., Bhagwat, A.,
B.

A direct crystallographic
demonstration that Type
II restriction
endonuclease PspGI flips
nucleotides

- 1.7
3bm3_1.pdb Szczepanowski, R.H.,
Carpenter, M., Czapinska,
H., Tamulaitis, G.,
Siksnys, V., Bhagwat, A.,
B.

A direct crystallographic
demonstration that Type
II restriction
endonuclease PspGI flips
nucleotides

- 1.7
3bs1.pdb Sidote, D.J., Barbieri,
C.M., Wu, T., Stock, A.M.

Structure of the
Staphylococcus aureus
AgrA LytTR Domain Bound
to DNA Reveals a Beta
Fold with an Unusual Mode
of Binding.

2008 1.6
3dvo.pdb Dunten, P.W., Little,
E.J., Gregory, M.T.,
Manohar, V.M., Dalton,
M., Hough, D., Bitinaite,
J., Horton, N.C.

The structure of SgrAI
bound to DNA; recognition
of an 8 base pair target.

2008 1.89
3dvo_1.pdb Dunten, P.W., Little,
E.J., Gregory, M.T.,
Manohar, V.M., Dalton,
M., Hough, D., Bitinaite,
J., Horton, N.C.

The structure of SgrAI
bound to DNA; recognition
of an 8 base pair target.

2008 1.89
3e6c.pdb Levy, C., Pike, K.,
Heyes, D.J., Joyce, M.G.,
Gabor, K., Smidt, H., van
der Oost, J., Leys, D.

Molecular basis of
halorespiration control
by CprK, a CRP-FNR type
transcriptional regulator

2008 1.8
3fde.pdb Hashimoto, H., Horton,
J.R., Zhang, X., Cheng,
X.

UHRF1, a modular
multi-domain protein,
regulates
replication-coupled
crosstalk between DNA
methylation and histone
modifications.

2009 1.41

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